Date of Graduation

Summer 2018

Degree

Master of Science in Chemistry

Department

Chemistry and Biochemistry

Committee Chair

Keiichi Yoshimatsu

Abstract

Autocatalytic intramolecular isopeptide bonds have been found in nature in certain gram-positive bacterial pilus structures. Recently, splitting of these domains that are capable of autocatalytic intramolecular isopeptide bond formation have been applied to create stable, selective, bio-orthogonal Catcher/Tag systems. The CnaB2 domain found in the FbaB pilus structure of Streptococcus pyogenes, has yielded the Catcher/Tag, Protein/Peptide systems termed SpyCatchter and SpyTag. Recent study has focused on tag optimization, stability and bio-orthogonality evaluation, along with applications in bioconjugation. I have recombinantly expressed SpyCatcher and SpyTag-fused proteins in E.coli, and conjugated them to fluorescent probes in order for use in fluorescence polarization/depolarization study. Using this system, I have observed the dependence of SpyTag concentration on the formation of the isopeptide bond. I have also been able to track the formation of this bond in real time.

Keywords

spycatcher, spytag, kinetics, fluorescence polarization, isopeptide bond

Subject Categories

Analytical Chemistry | Biochemistry | Biotechnology

Copyright

© Samuel Patricc Kasson

Open Access

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